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Home Products CGMP CRISPR ManufacturingCRISPR CGMP gRNA Manufacturing

CRISPR CGMP gRNA Manufacturing Services

For customers looking to accelerate their therapeutic gene editing program from discovery to clinical trials, our Engineering Run and full CGMP compliant guide RNA (gRNA) manufacturing and sequencing services offer a streamlined solution. Backed by comprehensive documentation, our services simplify regulatory filings, offering a straightforward path to clinical success.

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Overview

Leverage advanced CRISPR technology to empower and streamline genomics research and therapeutic development. Our specialized CGMP gRNA manufacturing and sequencing services ensure regulatory compliance while supporting complex gene editing projects. We are committed to delivering the highest manufacturing standards, ensuring that our gRNA products can enhance efficiency of CRISPR genome editing projects across every stage of therapeutic development. Bring your genomic research to the forefront of personalized medicine innovation.

The IDT advantage

The IDT advantage

  • Proven excellence With nearly 40 years of experience, Integrated DNA Technologies (IDT) leads with a proprietary synthesis process unlike any other in the industry supporting your journey from research to clinical applications with unmatched expertise.
  • State-of-the-art facility Our 41,000 sq. ft. Therapeutic Oligonucleotide Manufacturing Facility provides CGMP CRISPR manufacturing services tailored to your development—from preclinical studies to clinical trials.
  • Comprehensive quality control We prioritize quality with thorough release testing, including advanced identity assays such as gRNA sequencing. This ensures every CRISPR gRNA meets the highest standards of quality and consistency.
  • Regulatory support aligned to clinical phases IDT provides regulatory information tailored to your clinical phase, helping you meet requirements confidently and efficiently.
  • Dedicated expert team Your project is in the hands of a dedicated, cross-functional team of professionals at IDT. Each team member is an expert in their field, working diligently to ensure the success of your therapeutic CRISPR program.

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Start the conversation today to explore how our CGMP gRNA Manufacturing Services can accelerate your therapeutic gene editing program.

Pioneering personalized CRISPR therapy

Pioneering personalized CRISPR therapy

IDT and Aldevron partnered with the Children’s Hospital of Philadelphia (CHOP) to manufacture the world’s first mRNA-based personalized CRISPR therapy for an infant with urea cycle disorder (UCD). Delivered in just six months—three times faster than standard timelines for gene editing drug products.

Read the full story

Service details

IDT’s gRNAs produced at its Therapeutic Oligonucleotide Manufacturing Facility deliver the high-quality current Good Manufacturing Practices (CGMP) material required for successful completion of your preclinical studies and clinical trials. To further support regulatory compliance and accelerate IND/CTA filings, IDT offers gRNA sequencing services for customers manufacturing their CGMP gRNAs with us.

Engineering Run: Synthetic gRNA produced by the same manufacturing process as CGMP products but with limited Quality Assurance documentation.

CGMP: Synthetic gRNA manufactured under CGMP-compliant conditions and includes full Quality Assurance Documentation.

gRNA Sequencing Services
Sequence-level contaminants during gRNA manufacturing can potentially compromise therapeutic efficacy and delay regulatory approvals. IDT can help by integrating gRNA sequencing into your Engineering Run or CGMP manufacturing workflow. Our orthogonal identity assay provides full-length sequence verification to support regulatory filings and accelerate your therapeutic development timelines, without the added complexity of third-party vendors.

Engineering run CGMP
Cleanroom Certification not required ISO 8 Clean Room – Certified
Changeover In-place with cleaning validation In-place with cleaning validation
Materials QA release on raw materials QA release on raw materials
Batch records Draft based on customer’s specifications Based on customer specification
Release testing Qualified methods Validated methods

Through comprehensive quality control and analytical testing, we are committed to ensure that our therapeutic oligonucleotides consistently meet the regulatory requirements to accelerate your project and bring your discoveries to life.

Category Attribute Method
Identity Molecular weight ESI-MS
Sequence identity NGS-based gRNA sequencing
Purity Purity Single-channel CE or LC-MS
Process related impurities Elemental impurities
Residual solvents
USP <233>
USP <467>
Safety Endotoxin
Bioburden
USP <85> limulus amebocyte lysate (LAL)
USP <61/62>
Yield UV/Vis Optical density at 260nm
General Appearance Visual inspection

gRNA manufacturing

The functional performance of 100 nt Cas9 sgRNAs targeting HPRT1 was studied in K562 cells using cell-based editing activity and in vitro cleavage assays. As shown in Figure 1, pilot run gRNAs performed better than the RUO gRNAs with the same sequence but purified using the standard desalt method. However, similar in cellulo % editing and in vitro % cleavage performance were observed with pilot runs and HPLC-purified gRNAs. Moreover, different pilot runs exhibited similar functional activity, demonstrating batch-to-batch consistency.
gRNA manufacturing

Figure 1. Functional performance of 100 nt Cas9 sgRNAs targeting HPRT1 when used in K562 CRISPR editing and in vitro DNA cleavage experiments. CRISPR editing outcomes were assessed via NGS using the rhAmpSeq™ CRISPR Analysis System following electroporation (Lonza) into K562 cells. Cas9-mediated DNA cleavage in vitro was assessed using the Fragment Analyzer system. (n = 3, error bars represent standard deviation. RUO controls were purified using either HPLC or standard desalt methods). This data is generated from pilot runs on equivalent Q7 equipment using representative Q7 manufacturing processes, methods, and tests.

gRNA sequencing

To validate gRNA identity and detect contaminants, IDT performs complete sequencing of Engineering Run and CGMP oligos. Our method provides >500x read depth across the spacer region and implements stringent purity thresholds, ensuring compliance with regulatory expectations.
gRNA sequencing

Figure 2. High sensitivity of the gRNA sequencing assay for detecting single and cumulative base-level contaminants. Serial dilutions of wildtype sgRNA were spiked with known SNP variants to empirically assess detection limits. Results demonstrate 100% specificity across multiple dilution points, confirming robust performance for identifying single and cumulative contaminants in modified sgRNAs (n = 8–12 technical replicates per dilution).

Frequently asked questions

Yes, IDT provides complete NGS-based sequencing of Engineering Run and CGMP oligos as an identity assay for customers manufacturing gRNAs with us. This service helps confirm sequence identity as a release specification to support regulatory filings.

Disclaimer

CGMP refers to products manufactured under ICHQ7; IDT engineering runs and CGMP gRNA are for development and investigational use only. The performance characteristics of this product have not been established. This product is not intended to be used as final drug product. The purchaser is solely responsible for all decisions regarding the intended use of the product and any associated legal or regulatory obligations.
cGMP25-3903_001